STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WAS1WD_REPEATS_REGION domain-containing protein. (1529 aa)    
Predicted Functional Partners:
A0A1Y1WK44
Zinc_ribbon_16 domain-containing protein.
    
 0.997
A0A1Y1W0I2
Uncharacterized protein.
    
 0.996
A0A1Y1W1U8
Uncharacterized protein.
    
 0.996
A0A1Y1W1Z8
WD40 repeat-like protein; Belongs to the WD repeat SEC13 family.
    
 0.996
A0A1Y1WDI8
NPR2-domain-containing protein.
    
 0.996
A0A1Y1WLL8
WD40 repeat-like protein; Belongs to the WD repeat SEC13 family.
    
 0.996
A0A1Y1WI36
Uncharacterized protein.
   
 0.984
A0A1Y1WLJ6
Uncharacterized protein.
    
 0.982
A0A1Y1WBP8
WD40 repeat-like protein.
    
 0.966
A0A1Y1WCT3
Uncharacterized protein.
    
 0.966
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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