STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WAV2P-loop containing nucleoside triphosphate hydrolase protein. (363 aa)    
Predicted Functional Partners:
A0A1Y1W0Q9
Uncharacterized protein.
  
 0.851
A0A1Y1W227
ATP-dependent DNA helicase.
  
 0.851
A0A1Y1WMT9
P-loop containing nucleoside triphosphate hydrolase protein.
  
 
 0.754
A0A1Y1VY12
Uncharacterized protein.
   
 
 0.717
A0A1Y1W929
Ubiquitin-like protein.
    
 
 0.695
A0A1Y1WM43
Uncharacterized protein.
    
 
 0.693
A0A1Y1W0J3
E3 ubiquitin ligase SCF complex, Skp subunit; Belongs to the SKP1 family.
    
 
 0.680
A0A1Y1WN72
Putative negative regulator sulfur controller-3; Belongs to the SKP1 family.
    
 
 0.680
A0A1Y1W275
P-loop containing nucleoside triphosphate hydrolase protein.
  
 
 0.673
A0A1Y1WMR9
Ribokinase-like protein.
  
 
 0.673
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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