STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WBJ5Glycoside hydrolase; Belongs to the glycosyl hydrolase 17 family. (393 aa)    
Predicted Functional Partners:
A0A1Y1WL88
Actin/actin-like protein; Belongs to the actin family.
    
 0.777
A0A1Y1WH81
SWIB domain-containing protein.
    
 0.774
A0A1Y1W063
Bromodomain-containing protein.
    
 0.770
A0A1Y1VWR9
MPN domain-containing protein.
    
 0.765
A0A1Y1WN38
GATA-type domain-containing protein.
    
 0.749
A0A1Y1W0G5
Uncharacterized protein.
    
 0.746
A0A1Y1WE41
Glycoside hydrolase.
    
 0.736
A0A1Y1WEX9
Glycoside hydrolase.
    
 0.736
A0A1Y1W3E4
Uncharacterized protein.
    
 0.716
A0A1Y1W452
FKS1_dom1 domain-containing protein.
     
 0.701
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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