STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WBP2Uncharacterized protein. (693 aa)    
Predicted Functional Partners:
A0A1Y1WB27
Pre-mRNA-splicing factor prp46.
   
 0.999
A0A1Y1W5R6
DUF1716-domain-containing protein.
   
 0.998
A0A1Y1W079
Uncharacterized protein.
   
  0.992
A0A1Y1W314
Pre-mRNA-splicing factor SYF1.
   
 
 0.992
A0A1Y1W6S2
TPR-like protein.
   
 
 0.992
A0A1Y1W351
SKIP_SNW domain-containing protein.
   
 
 0.991
A0A1Y1VWY9
WD40 repeat-like protein.
   
 
 0.990
A0A1Y1W9V1
Splicing factor 3B subunit 1.
   
 
 0.990
A0A1Y1WAC2
MI domain-containing protein.
   
 
 0.990
A0A1Y1WB32
Elongation factor Tu GTP binding domain-containing 2.
   
 
 0.990
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.