STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WBR6Uncharacterized protein. (217 aa)    
Predicted Functional Partners:
A0A1Y1W6I2
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.748
A0A1Y1W7T5
DUF663-domain-containing protein.
   
  0.733
A0A1Y1W8S7
Bystin-domain-containing protein.
   
 0.725
A0A1Y1W4A6
Ribosomal_S5_C domain-containing protein.
   
 0.719
A0A1Y1VXF4
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 0.714
A0A1Y1W2M2
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
    
  0.714
A0A1Y1W9U7
Pre-rRNA-processing protein pno1.
   
  0.711
A0A1Y1WHM7
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
  0.710
A0A1Y1WJB2
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
  0.710
A0A1Y1W3Y4
Farnesyl-diphosphate farnesyltransferase.
    
 0.709
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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