STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WC39Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (399 aa)    
Predicted Functional Partners:
A0A1Y1WEW5
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.949
A0A1Y1WBZ2
Chromatin modification-related protein.
    
 0.944
A0A1Y1W5K8
NuA4-domain-containing protein.
    
 0.943
A0A1Y1VYS9
Enhancer of polycomb-like protein.
    
 0.930
A0A1Y1W6I2
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.926
A0A1Y1WFL1
MRG-domain-containing protein.
   
 0.921
A0A1Y1WD58
SANT_DAMP1_like domain-containing protein.
   
 0.911
A0A1Y1WL88
Actin/actin-like protein; Belongs to the actin family.
   
 0.909
A0A1Y1W938
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
   
 0.908
A0A1Y1W5Y3
YEATS domain-containing 4.
    
 0.895
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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