STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WCD4Riboflavin synthase domain-like protein. (673 aa)    
Predicted Functional Partners:
A0A1Y1WH65
Flavodoxin-like domain-containing protein.
 0.923
A0A1Y1W399
Cytochrome P450; Belongs to the cytochrome P450 family.
 
  
 
 0.803
A0A1Y1WHT6
Uncharacterized protein.
     
 0.796
A0A1Y1WD95
Cytochrome b5; Belongs to the cytochrome b5 family.
    
 0.753
DRE2
Fe-S cluster assembly protein DRE2; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis, facilitating the de novo assembly of a [4Fe-4S] cluster on the scaffold complex CFD1-NBP35. Electrons are transferred to DRE2 from NADPH via the FAD- and FMN-containing protein TAH18. TAH18-DRE2 are also required for the assembly of the diferric tyrosyl radical cofactor of ribonucleotide reductase (RNR), probably by [...]
    
 0.739
A0A1Y1W0Y7
Ferredoxin.
   
 0.733
A0A1Y1WH61
Phosphoadenosine phosphosulfate reductase thioredoxin.
  
 
 0.703
A0A1Y1W0Y4
Adenine nucleotide alpha hydrolases-like protein.
  
 
 0.699
A0A1Y1WEJ9
Tryptophan synthase beta subunit-like PLP-dependent enzyme.
  
 
 0.664
A0A1Y1WIR2
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 
 0.664
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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