STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WCH1P-loop containing nucleoside triphosphate hydrolase protein. (619 aa)    
Predicted Functional Partners:
A0A1Y1W022
Tr-type G domain-containing protein.
  
 
 0.793
A0A1Y1W6L7
Nucleic acid-binding protein.
   
 0.762
A0A1Y1W9D9
Tr-type G domain-containing protein.
   
 0.755
A0A1Y1WLB9
Ribosomal protein L4.
  
 
 0.740
A0A1Y1W6J0
Ribosomal protein, large subunit.
  
 
 0.723
A0A1Y1W7J8
Uncharacterized protein.
  
 
 0.718
A0A1Y1W2I5
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
    
 
 0.711
A0A1Y1WFR4
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
   0.711
A0A1Y1WC72
Uncharacterized protein.
  
 
 0.707
A0A1Y1WBX5
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
    0.705
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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