STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WCL2BZIP domain-containing protein. (321 aa)    
Predicted Functional Partners:
A0A1Y1WA73
ATP-dependent DNA ligase; Belongs to the ATP-dependent DNA ligase family.
    
 0.790
A0A1Y1WDV8
Lysophospholipase.
     
 0.786
A0A1Y1WCL4
Zn_dep_PLPC domain-containing protein.
    
 0.778
A0A1Y1W035
WD40 repeat-like protein.
    
 0.745
A0A1Y1WKU5
MBOAT-domain-containing protein; Belongs to the membrane-bound acyltransferase family.
     
 0.716
A0A1Y1W548
WD_REPEATS_REGION domain-containing protein.
    
 0.713
A0A1Y1WDM0
Uncharacterized protein.
   
 0.707
A0A1Y1WBC4
LNS2-domain-containing protein.
     
 0.705
A0A1Y1W571
NAP-domain-containing protein; Belongs to the nucleosome assembly protein (NAP) family.
    
   0.699
A0A1Y1WFE2
Ubiquitin-domain-containing protein.
    
 0.699
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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