STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WCS7Uncharacterized protein. (497 aa)    
Predicted Functional Partners:
A0A1Y1W0B4
GP-PDE domain-containing protein.
    
 0.836
A0A1Y1WDV8
Lysophospholipase.
    
 0.779
A0A1Y1VRB3
Uncharacterized protein.
    
 0.772
A0A1Y1WBQ3
Uncharacterized protein.
   
 0.745
A0A1Y1WLK1
HAD hydrolase.
   
 0.745
A0A1Y1WIA7
Serine/threonine-protein phosphatase.
   
 0.738
A0A1Y1WAG7
Uncharacterized protein.
   
 0.736
A0A1Y1WFP9
ClpP/crotonase.
    
 0.731
A0A1Y1WFR4
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 0.724
A0A1Y1W525
RhoGAP-domain-containing protein.
    
 0.721
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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