STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WD08Uncharacterized protein. (510 aa)    
Predicted Functional Partners:
A0A1Y1WAH2
DNase I-like protein.
 
   
 0.786
A0A1Y1W9Q6
SAC domain-containing protein.
  
  
 
0.710
A0A1Y1W828
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
     
 0.701
A0A1Y1VWJ9
Phosphatases II.
     
 0.697
A0A1Y1W259
Phosphoinositide phospholipase C.
     
 0.694
A0A1Y1WG24
SAICAR synthase-like protein.
     
 0.693
A0A1Y1VYM5
Proteasome subunit beta.
 
      0.678
A0A1Y1W1D4
C2 NT-type domain-containing protein.
     
 0.672
A0A1Y1WJC6
DNase I-like protein.
     
 0.672
A0A1Y1WLB5
SET domain-containing protein.
     
 0.439
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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