STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WD09Peptidase C14. (357 aa)    
Predicted Functional Partners:
A0A1Y1WGV1
Endonuclease.
    
 
 0.527
A0A1Y1W1P1
tRNA-binding domain-containing protein.
    
   0.485
A0A1Y1VZB8
AAA-domain-containing protein.
    
 
 0.466
A0A1Y1WGB3
AAA-domain-containing protein.
    
 
 0.466
A0A1Y1WMM7
AAA ATPase; Belongs to the AAA ATPase family.
    
 
 0.466
A0A1Y1W1G3
T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.
 
  
   0.444
A0A1Y1W0U6
UPF0005-domain-containing protein; Belongs to the BI1 family.
      
 0.441
A0A1Y1WKR7
Nucleic acid-binding protein.
    
   0.439
SLX1
Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA.
      
 0.431
A0A1Y1VVQ1
AAA-domain-containing protein; Belongs to the AAA ATPase family.
    
 
 0.421
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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