STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WD15Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family. (1038 aa)    
Predicted Functional Partners:
A0A1Y1W415
Synaptobrevin.
    
 0.938
A0A1Y1VZ85
Uncharacterized protein.
   
 0.925
A0A1Y1W501
t-SNARE; Belongs to the syntaxin family.
   
 0.844
A0A1Y1W529
t-SNARE; Belongs to the syntaxin family.
   
 0.844
A0A1Y1W5F5
t-SNARE.
   
 0.844
A0A1Y1WB44
t-SNARE.
   
 0.844
A0A1Y1WEY5
t-SNARE.
   
 0.844
A0A1Y1W7U5
Uncharacterized protein.
   
 0.716
A0A1Y1W3P2
Helical backbone metal receptor.
    
 0.712
A0A1Y1W1J6
NARG2_C domain-containing protein.
    
 0.691
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.