STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WD19F-box domain-containing protein. (296 aa)    
Predicted Functional Partners:
A0A1Y1W958
Putative RING-box protein 1A.
    
 0.872
A0A1Y1W0J3
E3 ubiquitin ligase SCF complex, Skp subunit; Belongs to the SKP1 family.
    
 0.838
A0A1Y1WN72
Putative negative regulator sulfur controller-3; Belongs to the SKP1 family.
    
 0.838
A0A1Y1W7G6
Ribosomal protein L2.
    
 0.817
A0A1Y1WAS6
Cullin-1; Belongs to the cullin family.
    
 0.797
A0A1Y1WE22
Cullin-domain-containing protein; Belongs to the cullin family.
    
 0.797
A0A1Y1WJZ5
Cullin-3; Belongs to the cullin family.
    
 0.797
A0A1Y1W470
AAA domain-containing protein.
    
 0.787
A0A1Y1WER4
Uncharacterized protein.
    
  0.776
A0A1Y1W4B3
Ubiquitin.
    
 0.774
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.