STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WD20Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (149 aa)    
Predicted Functional Partners:
A0A1Y1W929
Ubiquitin-like protein.
   
 0.999
A0A1Y1WJE0
RNI-like protein.
   
 0.999
A0A1Y1WIB6
Uncharacterized protein.
   
 0.998
A0A1Y1WIE0
Uncharacterized protein.
   
 0.998
A0A1Y1VZ05
Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family.
   
 0.996
A0A1Y1WND5
Uncharacterized protein.
    
 0.989
A0A1Y1VZK2
JmjC-domain-containing protein.
    
 0.988
A0A1Y1VVX5
Uncharacterized protein.
    
 0.987
A0A1Y1W5Z8
ThiF domain-containing protein.
  
 0.980
A0A1Y1W101
Importin N-terminal domain-containing protein.
   
 
 0.959
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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