STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WD43Nuclear transport factor 2. (123 aa)    
Predicted Functional Partners:
A0A1Y1WMS4
SUZ domain-containing protein.
   
 0.940
A0A1Y1W6D0
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.938
A0A1Y1W382
NPL4-domain-containing protein.
    
 0.932
A0A1Y1WFW4
Uncharacterized protein.
   
 0.918
A0A1Y1VSV1
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
   
 0.909
A0A1Y1W327
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
   
 0.909
A0A1Y1W3I4
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 
 0.895
A0A1Y1WJ93
Ras-related nuclear protein.
   
 
 0.895
A0A1Y1WI35
Uncharacterized protein.
    
 0.882
A0A1Y1W3D1
Excision repair cross-complementing rodent repair deficiency, complementation group 1.
   
 0.862
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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