STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WD67Aa_trans domain-containing protein. (523 aa)    
Predicted Functional Partners:
A0A1Y1WAY5
Rraga protein.
   
 0.670
A0A1Y1WJL2
Gtr1/RagA G protein Gtr2.
    
 0.661
A0A1Y1WM30
Uncharacterized protein.
    
 0.579
A0A1Y1WN47
ATPase, V0 complex, subunit D.
    
 0.567
A0A1Y1WDP7
Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.
    
 0.561
A0A1Y1W552
AMPKBI-domain-containing protein.
    
  0.519
A0A1Y1W415
Synaptobrevin.
     
 0.514
A0A1Y1VQZ2
Thioredoxin-like_fold domain-containing protein.
    
 0.513
A0A1Y1W025
HDAC_interact domain-containing protein.
    
 0.513
A0A1Y1WL98
Uncharacterized protein.
    
 0.513
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.