STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WD73tRNA-guanine transglycosylase. (412 aa)    
Predicted Functional Partners:
A0A1Y1W4D5
Queuine tRNA-ribosyltransferase catalytic subunit 1; Catalytic subunit of the queuine tRNA-ribosyltransferase (TGT) that catalyzes the base-exchange of a guanine (G) residue with queuine (Q) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, formi [...]
  
0.987
A0A1Y1WL44
6-pyruvoyl tetrahydrobiopterin synthase-like protein.
    
 0.585
A0A1Y1VZY2
NAD(P)-binding protein.
  
 
  0.576
A0A1Y1VXY6
P-loop containing nucleoside triphosphate hydrolase protein.
  
 
 0.574
A0A1Y1WMF4
Carbohydrate phosphatase.
  
 
  0.554
A0A1Y1VX39
Peptidylprolyl isomerase.
    
  0.515
A0A1Y1VXR2
Peptidylprolyl isomerase.
    
  0.515
A0A1Y1VXS1
Peptidylprolyl isomerase.
    
  0.515
A0A1Y1W7L5
Peptidylprolyl isomerase.
    
  0.515
A0A1Y1WGZ9
Peptidylprolyl isomerase.
    
  0.515
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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