STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WDF4Mitochondrial carrier; Belongs to the mitochondrial carrier (TC 2.A.29) family. (347 aa)    
Predicted Functional Partners:
A0A1Y1W526
KOW domain-containing protein.
   
 
 0.744
A0A1Y1WM81
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 
 0.728
A0A1Y1WLC9
Putative ribosomal protein L13.
   
   0.610
A0A1Y1W2I5
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
 
 0.606
A0A1Y1WIT9
60S ribosomal protein L2.
   
 
 0.605
A0A1Y1WJV8
Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.
   
 
 0.602
A0A1Y1WFR4
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
   0.588
A0A1Y1WHM7
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
   0.588
A0A1Y1WHX7
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
   0.587
A0A1Y1WD76
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.586
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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