STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WDM7S-adenosylmethionine decarboxylase. (435 aa)    
Predicted Functional Partners:
A0A1Y1W078
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
    
 0.881
A0A1Y1WL00
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
     
 0.839
A0A1Y1WDB3
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
 
  
 
 0.812
A0A1Y1WGA1
NAD(P)-binding protein.
   
 
 0.704
A0A1Y1W2N5
Saccharopine dehydrogenase.
     
 0.698
A0A1Y1W5D3
Saccharopine dehydrogenase.
     
 0.698
A0A1Y1VYN5
S-adenosyl-L-methionine-dependent methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
     
 0.680
A0A1Y1WKJ2
S-adenosyl-L-methionine-dependent methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
     
 0.680
A0A1Y1W3R2
S-adenosyl-L-methionine-dependent methyltransferase.
     
 0.672
A0A1Y1W3S5
DNMT1-RFD domain-containing protein.
     
 0.672
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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