STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WDN8Formyltransferase. (411 aa)    
Predicted Functional Partners:
A0A1Y1VZY2
NAD(P)-binding protein.
  
 
 0.936
A0A1Y1W7B8
NOL1/NOP2/sun family putative RNA met; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
 
 0.911
A0A1Y1WJW9
Thymidylate synthase.
  
 
 0.907
A0A1Y1W742
S-adenosyl-L-methionine-dependent methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
 
 0.903
A0A1Y1W1P1
tRNA-binding domain-containing protein.
    
 0.886
A0A1Y1W410
FTHFS-domain-containing protein.
    
 0.860
A0A1Y1VX95
FSH1 domain-containing protein.
  
 
 0.852
A0A1Y1VY32
Ovarian cancer-associated gene 2 protein.
  
 
 0.852
A0A1Y1W9P4
L-aminoadipate-semialdehyde dehydrogenase.
  
 
 0.849
A0A1Y1WAR9
5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
  
 
 0.841
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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