STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WEU3RCC1/BLIP-II protein. (390 aa)    
Predicted Functional Partners:
A0A1Y1WM25
Zf-CSL-domain-containing protein.
    
 
 0.977
A0A1Y1W3I4
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.842
A0A1Y1WJ93
Ras-related nuclear protein.
    
 0.842
A0A1Y1WIB6
Uncharacterized protein.
   
 0.841
A0A1Y1WIE0
Uncharacterized protein.
   
 0.841
A0A1Y1VXL4
HECT domain-containing protein.
 
  
 0.789
A0A1Y1W6I2
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
  0.753
A0A1Y1VXW6
Uncharacterized protein.
   
  0.723
A0A1Y1W4M3
BTD domain-containing protein.
   
 0.715
A0A1Y1W5L7
BTD domain-containing protein.
   
 0.715
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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