STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WF03Uncharacterized protein. (655 aa)    
Predicted Functional Partners:
A0A1Y1W2L3
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 
 0.790
A0A1Y1W014
Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.759
A0A1Y1WJA3
Serine/threonine-protein kinase.
    
 0.759
A0A1Y1VZY7
Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 0.756
A0A1Y1WBL5
DLIC-domain-containing protein.
    
 
 0.740
A0A1Y1W9C5
L domain-like protein.
    
 0.729
A0A1Y1WCN8
Autophagy-related protein.
   
 0.709
A0A1Y1WGB9
Peptidase C50 domain-containing protein.
    
 0.686
A0A1Y1WCT6
Negative regulator of the PHO system; Belongs to the protein kinase superfamily.
    
 0.643
A0A1Y1WJW3
Pkinase-domain-containing protein.
    
 0.643
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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