STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WF51Uncharacterized protein. (192 aa)    
Predicted Functional Partners:
A0A1Y1WJ54
Uncharacterized protein.
   
 0.995
A0A1Y1WKR6
Signal peptidase subunit 3.
   
 0.989
A0A1Y1WGT6
Signal peptidase complex catalytic subunit SEC11.
   
 0.984
A0A1Y1VYG9
Mitochondrial inner membrane protease subunit IMP2.
   
 0.847
A0A1Y1W4T5
Signal peptidase I family protein.
   
 0.847
A0A1Y1WLJ6
Uncharacterized protein.
   
 0.847
A0A1Y1W443
Glucose-regulated protein; Belongs to the heat shock protein 70 family.
   
 
 0.740
A0A1Y1W1Z7
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
     
 0.733
A0A1Y1WDL4
Acyl-CoA dehydrogenase NM domain-like protein.
     
 0.702
A0A1Y1WIP3
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit WBP1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the [...]
   
 0.642
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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