STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WF72Nascent polypeptide-associated complex, alpha subunit. (189 aa)    
Predicted Functional Partners:
A0A1Y1WI14
Nascent polypeptide-associated complex subunit beta.
   
 
 0.998
A0A1Y1W526
KOW domain-containing protein.
 
 
   0.991
A0A1Y1WGQ5
50S ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.980
A0A1Y1WLC9
Putative ribosomal protein L13.
   
   0.980
A0A1Y1W6J0
Ribosomal protein, large subunit.
   
 
 0.976
A0A1Y1W8R8
L30e-like protein.
   
 
 0.974
A0A1Y1W1K3
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.973
A0A1Y1WG78
60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.
   
 
 0.973
A0A1Y1VU19
Ribosomal_L18_c domain-containing protein.
   
 
 0.972
A0A1Y1W2M6
Putative 60s ribosomal protein l7.
   
   0.970
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
Server load: low (20%) [HD]