STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WF92Protein YIP. (174 aa)    
Predicted Functional Partners:
A0A1Y1W099
Protein YIP.
   
 
 0.942
A0A1Y1WAB8
Golgi apparatus membrane protein TVP23; Golgi membrane protein involved in vesicular trafficking. Belongs to the TVP23 family.
   
 
 0.840
A0A1Y1W0W9
Protein YIP.
   
 
0.681
A0A1Y1W2A8
Vps5-domain-containing protein.
    
  0.568
A0A1Y1WKK2
Clathrin adaptor, mu subunit; Belongs to the adaptor complexes medium subunit family.
     
 0.526
A0A1Y1W2M4
ADP-ribosylation factor Arf1; Belongs to the small GTPase superfamily. Arf family.
    
  0.476
A0A1Y1WIB5
ARF/SAR superfamily; Belongs to the small GTPase superfamily. Arf family.
    
  0.476
A0A1Y1WDV2
PX domain-containing protein.
    
  0.461
A0A1Y1WKX6
Vps5 domain-containing protein.
    
  0.461
A0A1Y1WDS6
YIF1-domain-containing protein.
   
 
 0.434
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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