STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WFH760S ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family. (147 aa)    
Predicted Functional Partners:
A0A1Y1VU19
Ribosomal_L18_c domain-containing protein.
  
 0.999
A0A1Y1VX41
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
   
 0.999
A0A1Y1VXF4
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
  
 
 0.999
A0A1Y1VZV2
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
  
 
 0.999
A0A1Y1VZW6
Translation protein SH3-like protein.
   
 0.999
A0A1Y1W047
Ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.999
A0A1Y1W090
60S ribosomal protein L34-B.
  
 0.999
A0A1Y1W1A3
Ribosomal protein S19e.
  
 
 0.999
A0A1Y1W1K3
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
  
 0.999
A0A1Y1W2I5
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
  
 0.999
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.