STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WFS7WD40 repeat-like protein. (313 aa)    
Predicted Functional Partners:
A0A1Y1WD11
Uncharacterized protein.
   
 0.995
A0A1Y1WMV4
Ssu72-like protein.
   
 0.995
A0A1Y1VZT7
mRNA cleavage and polyadenylation specificity factor complex endoribonuclease subunit Ysh1.
   
 0.994
A0A1Y1WBJ1
CPSF_A domain-containing protein.
    
 0.993
A0A1Y1WGF3
WD40 repeat-like protein.
   
 0.993
A0A1Y1WK31
Fip1 domain-containing protein.
   
 0.993
A0A1Y1W2L7
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.992
A0A1Y1WFM7
Uncharacterized protein.
    
 0.988
A0A1Y1WAJ8
Uncharacterized protein.
   
 
 0.984
A0A1Y1WMQ7
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 
 0.965
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.