STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WG83TFIID_20kDa domain-containing protein. (123 aa)    
Predicted Functional Partners:
A0A1Y1W119
WD40 repeat-like protein.
   
 0.999
A0A1Y1W4L6
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.999
A0A1Y1W594
DUF1546-domain-containing protein.
   
 0.999
A0A1Y1W7Q0
TAFII28-domain-containing protein.
    
 0.999
A0A1Y1W9H9
TAF4 domain-containing protein.
    
 0.999
A0A1Y1WIF3
Transcription factor TAFII-31.
   
 0.999
A0A1Y1WJ50
TAFII55_N domain-containing protein.
    
 0.999
A0A1Y1WJT8
Transcription initiation factor IID, 18 kDa subunit.
   
 0.999
A0A1Y1WLK0
Bromodomain-domain-containing protein.
    
 0.999
A0A1Y1WMJ7
Uncharacterized protein.
    
 0.999
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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