STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WH24WD repeat domain phosphoinositide-interacting protein 3-like protein. (372 aa)    
Predicted Functional Partners:
A0A1Y1W7P6
Uncharacterized protein.
    
 
 0.776
A0A1Y1WMS8
Uncharacterized protein.
   
0.741
A0A1Y1WI13
Uncharacterized protein.
    
 
 0.570
A0A1Y1WL14
APG6 domain-containing protein.
    
 
 0.558
A0A1Y1WFE8
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
   
  
 0.534
A0A1Y1W8U0
Uncharacterized protein.
      
 0.505
A0A1Y1WIH6
Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.
      
 0.491
A0A1Y1WMS1
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy.
      
 0.467
A0A1Y1W6B4
Autophagy-related protein 3.
   
  
 0.442
A0A1Y1WCN8
Autophagy-related protein.
   
  
 0.432
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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