STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WH42Uncharacterized protein. (438 aa)    
Predicted Functional Partners:
A0A1Y1W7J9
Phytanoyl-CoA dioxygenase family protein.
 
      0.773
A0A1Y1W548
WD_REPEATS_REGION domain-containing protein.
   
 0.709
A0A1Y1W987
Ipi1_N domain-containing protein.
    
 0.688
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.634
A0A1Y1WHP7
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
  0.621
A0A1Y1W7G6
Ribosomal protein L2.
    
 0.608
A0A1Y1W1E9
EF-hand.
    
 0.601
A0A1Y1W582
Calmodulin mutant SYNCAM11.
    
 0.601
A0A1Y1WJA2
Calmodulin; Belongs to the calmodulin family.
    
 0.601
A0A1Y1WDE1
Uncharacterized protein.
    
 0.600
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.