STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WH46HECT domain-containing protein. (1718 aa)    
Predicted Functional Partners:
A0A1Y1VT70
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
   
 0.793
DL89DRAFT_4419
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
   
 0.793
A0A1Y1VXU6
U-box domain-containing protein.
   
 0.770
A0A1Y1WLF1
U-box-domain-containing protein.
   
 0.770
A0A1Y1VXC4
Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.723
A0A1Y1VZ80
Uncharacterized protein.
   
 0.722
A0A1Y1W2Z5
Uncharacterized protein.
   
 0.722
A0A1Y1WA16
Uncharacterized protein.
   
 0.722
A0A1Y1W4B3
Ubiquitin.
   
 0.711
A0A1Y1WBJ4
Ubiquitin-activating emzyme E1; Belongs to the ubiquitin-activating E1 family.
   
 0.696
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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