STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WH97WD40 repeat-like protein. (414 aa)    
Predicted Functional Partners:
A0A1Y1WIB6
Uncharacterized protein.
   
 0.987
A0A1Y1WIE0
Uncharacterized protein.
   
 0.987
A0A1Y1VZT9
DNA-binding protein.
   
 0.978
A0A1Y1WE95
BUB1 N-terminal domain-containing protein.
   
 0.974
A0A1Y1W8L3
TPR-like protein.
   
 0.964
A0A1Y1WJA3
Serine/threonine-protein kinase.
   
 0.962
A0A1Y1VXN1
Uncharacterized protein.
   
 0.960
A0A1Y1WFH4
Uncharacterized protein.
    
 0.958
A0A1Y1WKL3
TPR-like protein.
  
 0.958
A0A1Y1W353
Mitotic checkpoint protein BUB3-like protein.
   
 0.957
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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