STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WI07Putative tyrosine-protein phosphatase. (212 aa)    
Predicted Functional Partners:
A0A1Y1VUY8
Protein-tyrosine phosphatase.
  
 
0.955
A0A1Y1VZD3
Putative tyrosine phosphatase family protein.
  
 
 
0.955
A0A1Y1W0Y7
Ferredoxin.
   
 
 0.625
A0A1Y1W233
NADH dehydrogenase iron-sulfur protein 7; Belongs to the complex I 20 kDa subunit family.
 
  
   0.623
A0A1Y1WEC9
Ras-domain-containing protein.
   
 
 0.613
A0A1Y1WLI4
Uncharacterized protein.
   
 
 0.613
A0A1Y1W9V6
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.
    
  0.562
A0A1Y1WKM4
LMWPc-domain-containing protein.
    
 0.552
A0A1Y1W2Y8
NADH-quinone oxidoreductase.
    
   0.543
A0A1Y1W6A4
NADH dehydrogenase I, D subunit; Belongs to the complex I 49 kDa subunit family.
    
   0.543
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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