STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WI11Sh3 domain of Nbp2. (53 aa)    
Predicted Functional Partners:
A0A1Y1WFN1
Protein serine/threonine phosphatase 2C.
    
 
 0.915
A0A1Y1WGI6
PB1 domain-containing protein.
   
 0.894
A0A1Y1VQU9
PBD-domain-containing protein.
    
 0.823
A0A1Y1WH71
Non-specific serine/threonine protein kinase.
    
 0.823
A0A1Y1WID0
Non-specific serine/threonine protein kinase.
    
 0.823
A0A1Y1W3G9
DH domain-containing protein.
    
 0.789
A0A1Y1WC09
DH domain-containing protein.
    
 0.789
A0A1Y1WGA2
DH domain-containing protein.
    
 0.789
A0A1Y1WIV5
Uncharacterized protein.
    
 0.789
A0A1Y1WK13
Kinase-like protein.
    
 0.773
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.