STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WI14Nascent polypeptide-associated complex subunit beta. (137 aa)    
Predicted Functional Partners:
A0A1Y1WF72
Nascent polypeptide-associated complex, alpha subunit.
   
 
 0.998
A0A1Y1VVX5
Uncharacterized protein.
    
   0.987
A0A1Y1W5R5
Uncharacterized protein.
   
 
 0.977
A0A1Y1W6J0
Ribosomal protein, large subunit.
   
 
 0.964
A0A1Y1W2I5
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
 
 0.963
A0A1Y1VZW6
Translation protein SH3-like protein.
   
   0.954
A0A1Y1WLJ3
Ribosomal protein L32e.
   
   0.952
A0A1Y1W1A3
Ribosomal protein S19e.
   
   0.943
A0A1Y1W9G8
L30e-like protein.
   
   0.943
A0A1Y1WHM7
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
   0.942
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.