STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UNG1Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (289 aa)    
Predicted Functional Partners:
A0A1Y1WFA7
DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family.
  
 0.866
A0A1Y1WLU4
DNA glycosylase.
   
 0.860
A0A1Y1WAV8
PRAI-domain-containing protein.
    
 0.837
A0A1Y1WGT5
IGPS-domain-containing protein.
    
 0.837
A0A1Y1WDQ4
CPSF_A domain-containing protein.
    
 
 0.808
A0A1Y1W9M5
Nucleic acid-binding protein.
   
 
 0.758
A0A1Y1W426
CMP/dCMP-type deaminase domain-containing protein; Belongs to the MT-A70-like family.
     
 0.677
A0A1Y1VUK1
Vezatin domain-containing protein.
  
 
 0.651
A0A1Y1VW55
Vezatin domain-containing protein.
  
 
 0.651
A0A1Y1W1L7
Vezatin domain-containing protein.
  
 
 0.651
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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