STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WIB2Pumilio1 in complex with Cyclinb reverse Rna. (405 aa)    
Predicted Functional Partners:
A0A1Y1VX46
CAF1-domain-containing protein.
    
 
 0.873
A0A1Y1WFW7
Endo/exonuclease/phosphatase domain-containing protein.
   
 
 0.694
A0A1Y1WF23
Ribosomal protein S2.
    
  0.687
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
    
  0.684
A0A1Y1VYG6
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
   
 
 0.671
A0A1Y1WB19
Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.
    
 
 0.668
A0A1Y1WFJ0
Not1-domain-containing protein.
   
 
 0.656
A0A1Y1W356
Tyrosine--tRNA ligase.
    
 
 0.655
A0A1Y1WIB6
Uncharacterized protein.
   
 
 0.640
A0A1Y1WIE0
Uncharacterized protein.
   
 
 0.640
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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