STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WK86HCP-like protein. (364 aa)    
Predicted Functional Partners:
A0A1Y1VZB9
PRKCSH domain-containing protein.
    
 0.859
A0A1Y1WB79
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.805
A0A1Y1WIR0
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.805
A0A1Y1W0V0
RING-type domain-containing protein.
    
 0.766
A0A1Y1WDY8
RING-type domain-containing protein.
    
 0.766
A0A1Y1WMC7
Uncharacterized protein.
    
 0.766
A0A1Y1VVQ1
AAA-domain-containing protein; Belongs to the AAA ATPase family.
   
 0.658
A0A1Y1VWZ6
AAA-domain-containing protein; Belongs to the AAA ATPase family.
   
 0.658
A0A1Y1VZ13
AAA-domain-containing protein; Belongs to the AAA ATPase family.
   
 0.658
A0A1Y1VZB8
AAA-domain-containing protein.
   
 0.658
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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