STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WKA0NAD(P)-binding protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (301 aa)    
Predicted Functional Partners:
A0A1Y1VYB5
Short-chain dehydrogenase/reductase SDR.
  
0.791
A0A1Y1W0D9
Short-chain dehydrogenase/reductase SDR.
  
 0.791
A0A1Y1WI67
NAD(P)-binding protein.
  
0.791
A0A1Y1W8G4
NAD(P)-binding protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 0.739
A0A1Y1W8M0
Alcohol dehydrogenase class III.
  
 0.738
A0A1Y1W0Y7
Ferredoxin.
  
 0.729
A0A1Y1W9Z8
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
   
 0.717
A0A1Y1VX95
FSH1 domain-containing protein.
   
 
 0.708
A0A1Y1VY32
Ovarian cancer-associated gene 2 protein.
   
 
 0.708
A0A1Y1W4Q5
Amino_oxidase domain-containing protein.
  
 
 0.704
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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