STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WKB5Zn-dependent exopeptidase. (727 aa)    
Predicted Functional Partners:
A0A1Y1WAG7
Uncharacterized protein.
    
 0.567
A0A1Y1W2P0
Alpha/beta-hydrolase.
  
 0.543
A0A1Y1W3K1
Uncharacterized protein.
  
 0.543
A0A1Y1W412
Uncharacterized protein.
  
 0.543
A0A1Y1W5W3
Alpha/beta-hydrolase.
  
 0.543
A0A1Y1WLE0
Alpha/beta-hydrolase.
  
 0.543
A0A1Y1WCS9
E3 ubiquitin-protein ligase.
    
 0.526
A0A1Y1VYV3
Uncharacterized protein.
   
 0.521
A0A1Y1WN35
Uncharacterized protein.
   
 0.521
A0A1Y1VV95
Subtilisin-like protein; Belongs to the peptidase S8 family.
  
 0.502
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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