STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WKF1Uncharacterized protein. (175 aa)    
Predicted Functional Partners:
A0A1Y1VZY3
Uncharacterized protein.
   
 
 0.856
A0A1Y1W0J4
Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.
   
  0.852
A0A1Y1WLB9
Ribosomal protein L4.
   
 
 0.848
A0A1Y1W3N6
Uncharacterized protein.
   
   0.846
A0A1Y1W784
Uncharacterized protein.
   
 
 0.833
A0A1Y1W578
Uncharacterized protein.
   
   0.828
A0A1Y1W951
50S ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
   
 
 0.825
A0A1Y1W6E3
MRP-L46 domain-containing protein.
   
   0.821
A0A1Y1WD44
ClpS-like protein.
   
 
 0.819
A0A1Y1W9I4
Uncharacterized protein.
   
 
 0.815
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.