STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WKM8Homocysteine S-methyltransferase. (428 aa)    
Predicted Functional Partners:
A0A1Y1WMD5
Riboflavin synthase domain-like protein.
  
 0.854
A0A1Y1WMC9
5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase.
  
 
 0.852
A0A1Y1WIE3
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
 
 0.814
A0A1Y1WL31
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
 
 0.814
A0A1Y1W1P1
tRNA-binding domain-containing protein.
  
 
 0.805
A0A1Y1W0G6
Homoserine dehydrogenase.
  
 
 0.786
A0A1Y1WMB5
Adenosylhomocysteinase.
  
 
 0.785
A0A1Y1WL00
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
  
 
 0.783
A0A1Y1W410
FTHFS-domain-containing protein.
  
 
 0.782
A0A1Y1WJ71
Tryptophan synthase beta subunit-like PLP-dependent enzyme.
  
 0.776
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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