STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WKY4GIDA-domain-containing protein. (666 aa)    
Predicted Functional Partners:
A0A1Y1WKQ6
tRNA modification GTPase GTPBP3, mitochondrial-like protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
 0.982
A0A1Y1W9A8
Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.
 
      0.900
A0A1Y1WGN6
5-methylaminomethyl-2-thiouridylate-methyltransferase.
  
 0.856
A0A1Y1W5F7
3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family.
      0.533
A0A1Y1WIB2
Pumilio1 in complex with Cyclinb reverse Rna.
    
   0.527
A0A1Y1VS32
FAD dependent oxidoreductase.
     
 0.504
A0A1Y1VS87
GFA domain-containing protein.
     
 0.504
A0A1Y1VZ61
FAD dependent oxidoreductase.
     
 0.504
A0A1Y1W2B0
Stress-response A/B barrel domain-containing protein.
     
 0.504
A0A1Y1WHM9
Nucleotide-binding domain-containing protein.
     
 0.504
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.