STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WL14APG6 domain-containing protein. (343 aa)    
Predicted Functional Partners:
A0A1Y1W8K6
Phosphatidylinositol 3-kinase VPS34.
    
 0.999
A0A1Y1WB88
Protein kinase domain-containing protein.
    
 0.999
A0A1Y1VXE5
Kinase-like protein.
    
 0.996
A0A1Y1W675
Ubiquitinyl hydrolase 1.
     
 0.980
A0A1Y1W9P8
Alpha/beta-hydrolase.
    
 
 0.963
A0A1Y1W6B4
Autophagy-related protein 3.
   
 0.902
A0A1Y1WMS1
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy.
   
 0.889
A0A1Y1WFE8
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
    
 0.884
A0A1Y1WMS8
Uncharacterized protein.
    
 0.880
A0A1Y1W980
Uncharacterized protein.
    
 0.859
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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