STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WLR4Cytidine deaminase-like protein. (179 aa)    
Predicted Functional Partners:
A0A1Y1VZU2
SET domain-containing protein.
   
 0.958
A0A1Y1W5N7
CMP/dCMP-type deaminase domain-containing protein.
   
 0.958
A0A1Y1W175
Uncharacterized protein.
 
      0.733
A0A1Y1WJW9
Thymidylate synthase.
  
 
 0.671
A0A1Y1W8M0
Alcohol dehydrogenase class III.
  
 
  0.656
A0A1Y1WFA7
DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family.
  
 
 0.603
A0A1Y1VXY6
P-loop containing nucleoside triphosphate hydrolase protein.
  
 
 0.582
A0A1Y1W5V1
Uridine nucleosidase.
   
 0.573
A0A1Y1W426
CMP/dCMP-type deaminase domain-containing protein; Belongs to the MT-A70-like family.
   
 0.570
A0A1Y1WCP0
Uncharacterized protein.
   
 
 0.568
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.