STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WMS93-phosphoserine/phosphohydroxythreonine aminotransferase. (388 aa)    
Predicted Functional Partners:
A0A1Y1WM78
D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
 0.986
A0A1Y1WAH3
Tryptophan synthase beta subunit-like PLP-dependent enzyme.
   
 0.858
A0A1Y1WIR9
Aminotran_5 domain-containing protein.
    
 0.796
A0A1Y1W9U4
Phosphoserine phosphatase serb.
  
 
 0.795
A0A1Y1WB01
Phosphoserine phosphatase serb.
  
 
 0.795
A0A1Y1W1D2
Glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
     
 0.757
A0A1Y1WDF6
PRA-CH domain-containing protein.
  
  
 0.748
A0A1Y1W0U9
Tryptophan synthase.
  
  
 0.730
A0A1Y1WIR2
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 
 0.730
A0A1Y1W841
OAS-TL 2 protein.
  
 
 0.728
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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