STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WNC2Uncharacterized protein. (507 aa)    
Predicted Functional Partners:
A0A1Y1WN28
TMP-TENI-domain-containing protein.
 
 
 0.992
A0A1Y1W5W7
DNA polymerase.
 
      0.892
A0A1Y1W9U3
Thiamine pyrophosphokinase; Belongs to the thiamine pyrophosphokinase family.
    
 0.809
A0A1Y1W973
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
 
    0.800
A0A1Y1WMP6
SNO glutamine amidotransferase.
    
 0.772
A0A1Y1W0P1
Ribokinase-like protein.
  
 
 0.762
A0A1Y1WAW0
Uncharacterized protein.
    
 0.732
A0A1Y1VXF0
Phosphoglycerate mutase-like protein; Belongs to the histidine acid phosphatase family.
     
 0.731
A0A1Y1WBI9
Nudix hydrolase domain-containing protein.
  
 
  0.725
A0A1Y1WKM4
LMWPc-domain-containing protein.
    
  0.721
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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