STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WNU0Uncharacterized protein. (217 aa)    
Predicted Functional Partners:
A0A1Y1WMT4
L domain-like protein.
   
 0.996
A0A1Y1WM27
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.995
A0A1Y1W964
Small nuclear ribonucleo protein F.
   
 0.994
A0A1Y1WCV7
Small nuclear ribonucleoprotein Sm D2.
   
 0.994
A0A1Y1WFB2
Sm-like ribonucleo protein.
   
 0.994
A0A1Y1WLH4
Small nuclear ribonucleoprotein G.
   
 0.994
A0A1Y1WGU1
Matrin-type domain-containing protein.
   
 0.989
A0A1Y1WB32
Elongation factor Tu GTP binding domain-containing 2.
   
 
 0.983
A0A1Y1WEY8
Putative G10 protein.
   
 
 0.981
A0A1Y1VY24
TPR-like protein.
   
 
 0.980
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.