Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKE08817.1 | AKE08818.1 | XJ20_02470 | XJ20_02475 | Oxidative damage protection protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes; Belongs to the Fe(2+)-trafficking protein family. | Adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.573 |
| AKE08817.1 | mltC | XJ20_02470 | XJ20_02465 | Oxidative damage protection protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes; Belongs to the Fe(2+)-trafficking protein family. | Murein transglycosylase; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division. | 0.693 |
| AKE08817.1 | trmB | XJ20_02470 | XJ20_02480 | Oxidative damage protection protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes; Belongs to the Fe(2+)-trafficking protein family. | tRNA (guanine-N7)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family. | 0.422 |
| AKE08818.1 | AKE08817.1 | XJ20_02475 | XJ20_02470 | Adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Oxidative damage protection protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes; Belongs to the Fe(2+)-trafficking protein family. | 0.573 |
| AKE08818.1 | AKE08820.1 | XJ20_02475 | XJ20_02485 | Adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.545 |
| AKE08818.1 | AKE10179.1 | XJ20_02475 | XJ20_09945 | Adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.885 |
| AKE08818.1 | AKE12699.1 | XJ20_02475 | XJ20_23520 | Adenine glycosylase; Adenine glycosylase active on G-A mispairs. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.519 |
| AKE08818.1 | birA | XJ20_02475 | XJ20_22260 | Adenine glycosylase; Adenine glycosylase active on G-A mispairs. | biotin--[acetyl-CoA-carboxylase] synthetase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon. | 0.573 |
| AKE08818.1 | mglC | XJ20_02475 | XJ20_15925 | Adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Beta-methylgalactoside transporter permease; ABC transporter; functions in galactose transport; part of MglA2C2B transporter complex; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. | 0.503 |
| AKE08818.1 | mltC | XJ20_02475 | XJ20_02465 | Adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Murein transglycosylase; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division. | 0.469 |
| AKE08818.1 | mutS | XJ20_02475 | XJ20_19795 | Adenine glycosylase; Adenine glycosylase active on G-A mispairs. | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | 0.513 |
| AKE08818.1 | sfsA | XJ20_02475 | XJ20_02730 | Adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SfsA family. | 0.925 |
| AKE08818.1 | trmB | XJ20_02475 | XJ20_02480 | Adenine glycosylase; Adenine glycosylase active on G-A mispairs. | tRNA (guanine-N7)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family. | 0.616 |
| AKE08820.1 | AKE08818.1 | XJ20_02485 | XJ20_02475 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.545 |
| AKE08820.1 | mltC | XJ20_02485 | XJ20_02465 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Murein transglycosylase; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division. | 0.448 |
| AKE08820.1 | trmB | XJ20_02485 | XJ20_02480 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | tRNA (guanine-N7)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family. | 0.810 |
| AKE10179.1 | AKE08818.1 | XJ20_09945 | XJ20_02475 | Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology. | Adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.885 |
| AKE10179.1 | AKE12699.1 | XJ20_09945 | XJ20_23520 | Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.890 |
| AKE10179.1 | birA | XJ20_09945 | XJ20_22260 | Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology. | biotin--[acetyl-CoA-carboxylase] synthetase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon. | 0.859 |
| AKE12699.1 | AKE08818.1 | XJ20_23520 | XJ20_02475 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.519 |
page 1 of 2